Labs

Labs

• Lab 1 : Introduction to Working on Unity
• Lab 2 : Introduction to R, RStudio and Reproducible Reports
• Lab 3 : Running bioinformatics software on Unity (Blast, Read mapping)
  
• Lab 4 : NEON Data Transformation with dplyr
• Lab 5 : NEON Data Visualization with ggplot
• Lab 6 : Table joins of NEON MAG, metagenomic and chemistry data
• Lab 7 : Mapping the NEON data
• Lab 8: Genome representations
• Lab 9 : Phylogenetic tree visualization using ggtree
• Lab 10 : Read abundance - normalization and statistics

Sharing and Publishing

• Lab : Connecting a Github repo site with a RStudio project
• Lab : Adding references to your report with Zotero
• Lab : Quarto Manuscripts
• Lab : Building a 5 tab web site with Quarto
• Lab : R Shiny

Manuscript

• PathoGen manuscript : Deadline Dec 10